Pathway and biological interpretation

MetaboGraph

MetaboGraph is a Framework for Metabolomics and Lipidomics Annotation and Pathway Network Analysis that provides end-to-end workflow for metabolite identification, pathway enrichment, net analysis, and multi-omics integration. Designed for both beginner and advanced users, MetaboGraph combines powerful computational methods with an intuitive graphical interface.

LC-MSPython packageOpen source

Editorial additions pending. This submission has been accepted into the catalogue. Detailed metadata and editorial review may follow in later updates. Missing information does not mean a capability is unsupported.

Overview

MetaboGraph is a Framework for Metabolomics and Lipidomics Annotation and Pathway Network Analysis that provides end-to-end workflow for metabolite identification, pathway enrichment, net analysis, and multi-omics integration. Designed for both beginner and advanced users, MetaboGraph combines powerful computational methods with an intuitive graphical interface.

Scientific fit

Primary function

Pathway and biological interpretation

Other functions

Reference data and database search, Visualization and reporting, Multi-omics integration

Access and documentation

Evidence and review

Core publications

Resource papers, direct updates and tool-specific methods. Selection policy.

  1. Primary publication doi:10.1021/acs.analchem.6c01446

Related tools

Entry history

Changes to this catalogue entry, not the tool's software release history. Acceptance and editorial review are separate.

Original submission and discussion

  1. 2026-09-23 · First committed entry

    Add draft tool entry for MetaboGraph

    View change · Entry at this revision

Full GitHub history